Table of Contents

1 Example of Org-Babel for R Literate Programming

1.1 R text output

A simple summary.

x <- rnorm(10)

    Min.  1st Qu.   Median     Mean  3rd Qu.     Max. 
-1.92223 -0.40585  0.37257  0.07595  0.63745  1.40303

1.2 R graphics output

Note we use the object x generated in previous code block, thanks to the header option :session *R*. The output graphics file is a.png.

y <- rnorm(10)
plot(x, y)


Same plot with larger dimension:

plot(x, y)


2 Example of math

\begin{equation} y = \exp\left[\frac{(x-\mu)^{2}}{2\sigma^{2}}\right] \end{equation}

3 Example of citations

references.bib is taken from https://gitlab.com/aprl/bibfile.

(Lowry et al. 1951)

(Lowry et al. 1951)


Lowry, Oliver H., Nira J. Rosebrough, A. Lewis Farr, and Rose J. Randall. 1951. “PROTEIN MEASUREMENT with the FOLIN PHENOL REAGENT.” Journal of Biological Chemistry 193 (1):265–75. http://www.jbc.org/content/193/1/265.short.